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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs74964464 chr2:142863360 C/T PRHOXNB chr13:28552243-28562774:- 0.57 7.64 4.79E-10 Box Plot
ACC rs75032904 chr18:37106913 T/C PRHOXNB chr13:28552243-28562774:- 0.7 9.18 1.85E-12 Box Plot
ACC rs75128325 chr6:62321611 T/G PRHOXNB chr13:28552243-28562774:- 0.59 7.82 2.45E-10 Box Plot
ACC rs7513795 chr1:167878128 G/A PRHOXNB chr13:28552243-28562774:- 0.58 7.71 3.67E-10 Box Plot
ACC rs7516279 chr1:167878621 C/T PRHOXNB chr13:28552243-28562774:- 0.58 7.71 3.67E-10 Box Plot
ACC rs75312545 chr8:74445792 G/T PRHOXNB chr13:28552243-28562774:- 0.6 8.47 2.33E-11 Box Plot
ACC rs75363804 chr7:17254321 G/A TFDP3 chrX:132350697-132352376:- 0.86 8.09 9.3E-11 Box Plot
ACC rs75403002 chr8:112860408 T/C KRT14 chr17:39738531-39743173:- 1.13 7.56 6.24E-10 Box Plot
ACC rs75403002 chr8:112860408 T/C KRT6C chr12:52862300-52867569:- 0.82 11.69 3.61E-16 Box Plot
ACC rs75459964 chr7:17254113 A/G TFDP3 chrX:132350697-132352376:- 0.86 8.09 9.3E-11 Box Plot
ACC rs75475345 chr17:42967765 A/T PRHOXNB chr13:28552243-28562774:- 0.68 8.53 1.87E-11 Box Plot
ACC rs75498779 chr11:8473467 G/A PRHOXNB chr13:28552243-28562774:- 0.63 7.53 7.08E-10 Box Plot
ACC rs75523607 chr13:105320718 G/T PRHOXNB chr13:28552243-28562774:- 0.72 7.77 2.99E-10 Box Plot
ACC rs75526429 chr10:34016940 T/C GAGE2D chrX:49207160-49214420:+ 0.67 8.27 4.72E-11 Box Plot
ACC rs75564562 chr1:82367591 T/C GPR128 chr3:100328433-100414323:+ 1.01 8.16 7.13E-11 Box Plot